Xmipp

xmipp_volume_reslice (v3.0)

Usage

Reslice a volume aligning any X or Y direction with Z axis. The output volume also has the dimensions rotated, so all the information in the volume is kept.

See also
transform_geometry

Parameters

-i <input_file>
Input volume file
-o <output_file>
Output volume file
--face <new_front_face>
Face to be brought to front.
where <new_front_face> can be:
  • top Align -Y axis to Z axis, rotating 90 degrees around X axis
  • left Align -X axis to Z axis, rotating -90 degrees around Y axis
  • bottom Align Y axis to Z axis, rotating -90 degrees around X axis
  • right Align X axis to Z axis, rotating 90 degrees around Y axis
--flip
Flip the slices along Z axis after reslice

Examples and notes

Reslice a volume showing left face as new front face:
xmipp_volume_reslice -i original.vol -o resliced.vol --face left 

User's comments

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